Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS06005 | Not Available | Negative | 1531685 - 1532254 | 19866.8 |
| duf2238 domain-containing protein | LC55x_RS06010 | Not Available | Negative | 1532296 - 1532952 | 24873.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | LC55x_RS06015 | Not Available | Negative | 1532989 - 1534056 | 37788.6 |
| duf2066 domain-containing protein | LC55x_RS06020 | Not Available | Positive | 1534579 - 1535655 | 37837.3 |
| ai-2e family transporter | LC55x_RS06025 | Not Available | Positive | 1535658 - 1536848 | 42965.4 |
| dnaa regulatory inactivator hda | LC55x_RS06030 | Not Available | Positive | 1536845 - 1537573 | 26022.1 |
| hypothetical protein | LC55x_RS26745 | Not Available | Negative | 1538316 - 1538690 | 14104.0 |
| o-acetyl-adp-ribose deacetylase | LC55x_RS06035 | Not Available | Negative | 1538742 - 1539242 | 17542.2 |
| rna 2'-phosphotransferase | LC55x_RS06040 | Not Available | Negative | 1539247 - 1539801 | 20254.1 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | LC55x_RS06045 | Not Available | Negative | 1539885 - 1540613 | 26210.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
