Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kpsf/gutq family sugar-phosphate isomerase | LC55x_RS05905 | Not Available | Negative | 1509793 - 1510806 | 35228.6 |
| bola family protein | LC55x_RS05910 | Not Available | Positive | 1511041 - 1511280 | 8537.23 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | LC55x_RS05915 | Not Available | Positive | 1511401 - 1512657 | 43930.2 |
| duf3108 domain-containing protein | LC55x_RS05920 | Not Available | Negative | 1512957 - 1513664 | 25146.1 |
| duf3108 domain-containing protein | LC55x_RS05925 | Not Available | Negative | 1513661 - 1514380 | 26444.7 |
| phosphoribosylglycinamide formyltransferase | LC55x_RS05930 | Not Available | Negative | 1514472 - 1515155 | 23970.9 |
| tonb-dependent receptor | LC55x_RS05935 | Not Available | Negative | 1515362 - 1517680 | 85162.0 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | LC55x_RS05940 | Not Available | Negative | 1517997 - 1519133 | 40563.5 |
| phosphonate metabolism transcriptional regulator phnf | LC55x_RS05945 | Not Available | Positive | 1519256 - 1520122 | 31732.8 |
| hemopexin repeat-containing protein | LC55x_RS05950 | Not Available | Positive | 1520221 - 1522245 | 72528.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
