Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | LC55x_RS05655 | Not Available | Negative | 1459355 - 1460431 | 39405.1 |
| wgr domain-containing protein | LC55x_RS05660 | Not Available | Negative | 1460739 - 1460993 | 9587.66 |
| glxa family transcriptional regulator | LC55x_RS05665 | Not Available | Negative | 1461108 - 1462073 | 35315.2 |
| cysteine hydrolase family protein | LC55x_RS05670 | Not Available | Positive | 1462186 - 1462827 | 23267.2 |
| 3-dehydroquinate synthase | LC55x_RS05675 | Not Available | Negative | 1462936 - 1464042 | 38372.2 |
| shikimate kinase | LC55x_RS05680 | Not Available | Negative | 1464039 - 1464608 | 20428.4 |
| dodecin family protein | LC55x_RS05685 | Not Available | Positive | 1464753 - 1464956 | 7175.66 |
| kinase | LC55x_RS05690 | Not Available | Negative | 1465278 - 1466102 | 30442.5 |
| pyridoxamine 5'-phosphate oxidase | LC55x_RS05695 | Not Available | Positive | 1466120 - 1466725 | 22983.0 |
| aminoglycoside 6'-n-acetyltransferase | LC55x_RS05700 | Not Available | Positive | 1466722 - 1467189 | 17187.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
