Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS05505 | Not Available | Negative | 1414480 - 1414935 | 17271.0 |
| peptide chain release factor 3 | LC55x_RS05510 | Not Available | Negative | 1414968 - 1416572 | 59058.9 |
| m23 family metallopeptidase | LC55x_RS05515 | Not Available | Negative | 1416832 - 1417719 | 31875.8 |
| hypothetical protein | LC55x_RS05520 | Not Available | Negative | 1417782 - 1418885 | 40132.8 |
| homoserine o-succinyltransferase | LC55x_RS05525 | Not Available | Positive | 1419203 - 1420261 | 38165.0 |
| o-succinylhomoserine (thiol)-lyase | LC55x_RS05530 | Not Available | Positive | 1420324 - 1421508 | 41550.5 |
| homoserine dehydrogenase | LC55x_RS05535 | Not Available | Positive | 1421505 - 1422635 | 38779.1 |
| duf3089 domain-containing protein | LC55x_RS05540 | Not Available | Positive | 1423528 - 1424685 | 42970.7 |
| hypothetical protein | LC55x_RS05545 | Not Available | Positive | 1424703 - 1425257 | 20284.4 |
| glycosyl hydrolase family 18 protein | LC55x_RS28585 | Not Available | Negative | 1425722 - 1427746 | 70158.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
