Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS05260 | Not Available | Negative | 1334735 - 1335685 | 33381.8 |
| rna polymerase sigma factor | LC55x_RS05265 | Not Available | Negative | 1335678 - 1336313 | 23367.7 |
| spfh domain-containing protein | LC55x_RS05270 | Not Available | Positive | 1336406 - 1337362 | 34950.6 |
| nfed family protein | LC55x_RS05275 | Not Available | Positive | 1337366 - 1337806 | 15870.5 |
| hypothetical protein | LC55x_RS05280 | Not Available | Positive | 1337810 - 1338361 | 19695.5 |
| glycine cleavage system aminomethyltransferase gcvt | LC55x_RS05285 | Not Available | Positive | 1338648 - 1339784 | 40817.1 |
| 2-hydroxychromene-2-carboxylate isomerase | LC55x_RS05290 | Not Available | Positive | 1339795 - 1340418 | 22579.8 |
| glycine cleavage system protein gcvh | LC55x_RS05295 | Not Available | Positive | 1340632 - 1341027 | 14045.1 |
| hypothetical protein | LC55x_RS05300 | Not Available | Negative | 1341701 - 1342411 | 26399.1 |
| hypothetical protein | LC55x_RS05305 | Not Available | Negative | 1342423 - 1342710 | 10160.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
