Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | LC55x_RS05215 | Not Available | Negative | 1322520 - 1323635 | 40897.6 |
| tmem165/gdt1 family protein | LC55x_RS05220 | Not Available | Negative | 1323842 - 1324432 | 21101.1 |
| hypothetical protein | LC55x_RS05225 | Not Available | Negative | 1326070 - 1327014 | 34397.7 |
| aldo/keto reductase | LC55x_RS05230 | Not Available | Positive | 1327091 - 1328086 | 36799.6 |
| hemin uptake protein hemp | LC55x_RS28580 | Not Available | Positive | 1328205 - 1328453 | 8744.72 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | LC55x_RS05240 | Not Available | Positive | 1328802 - 1331102 | 83299.3 |
| hypothetical protein | LC55x_RS05245 | Not Available | Positive | 1331105 - 1331683 | 21228.5 |
| duf6607 family protein | LC55x_RS05250 | Not Available | Positive | 1331740 - 1332729 | 37301.0 |
| hypothetical protein | LC55x_RS26725 | Not Available | Negative | 1332776 - 1333018 | 8212.27 |
| pdz domain-containing protein | LC55x_RS05255 | Not Available | Negative | 1333379 - 1334704 | 46099.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
