Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| three component abc system middle component | LC55x_RS26705 | Not Available | Negative | 1272972 - 1273484 | 18255.4 |
| abc-three component system protein | LC55x_RS05040 | Not Available | Negative | 1273487 - 1274632 | 41981.9 |
| lta synthase family protein | LC55x_RS05045 | Not Available | Negative | 1275145 - 1277103 | 72351.4 |
| hypothetical protein | LC55x_RS05050 | Not Available | Positive | 1277838 - 1278374 | 19239.6 |
| rimk/lysx family protein | LC55x_RS05055 | Not Available | Positive | 1278705 - 1279154 | 16415.8 |
| 30s ribosomal protein s6--l-glutamate ligase | LC55x_RS05060 | Not Available | Positive | 1279206 - 1280114 | 32494.4 |
| response regulator transcription factor | LC55x_RS05065 | Not Available | Positive | 1280697 - 1281380 | 25159.2 |
| hamp domain-containing sensor histidine kinase | LC55x_RS05070 | Not Available | Positive | 1281385 - 1282722 | 49594.3 |
| branched-chain amino acid transaminase | LC55x_RS05075 | Not Available | Negative | 1283107 - 1284021 | 33137.5 |
| duf4124 domain-containing protein | LC55x_RS05080 | Not Available | Negative | 1284131 - 1284856 | 25075.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
