Nitrosopumilus adriaticus strain NF5

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Nitrosopumilus

Description

Nitrosopumilus adriaticus strain NF5 is a unique archaeal microorganism characterized by a single replicon. This strain is part of the ecologically significant group of ammonia-oxidizing archaea (AOA), which play a crucial role in the nitrogen cycle, particularly in marine environments. The complete genomic information for Nitrosopumilus adriaticus strain NF5 is cataloged under the accession number NZ_CP011070.1. The single replicon indicates a streamlined genome organization that is typical of many archaea, which can contribute to their adaptability and efficiency in nutrient cycling. As an ammonia-oxidizing archaeon, Nitrosopumilus adriaticus NF5 is capable of oxidizing ammonia to nitrite, a key step in the process of nitrification. This biological process is fundamental to maintaining nitrogen balance in marine ecosystems, influencing both primary productivity and the overall health of aquatic environments. The presence of such archaea, including Nitrosopumilus adriaticus strain NF5, underscores the importance of microorganisms in biogeochemical cycles, particularly in oligotrophic waters where nutrient levels are low. Understanding the role of this strain can provide insights into the dynamics of nitrogen transformation and the potential implications for oceanic carbon cycling and climate change. As researchers continue to study these microorganisms, they may uncover further details about their ecological roles and contributions to marine biogeochemistry.

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderNitrosopumilales
FamilyNitrosopumilaceae
GenusNitrosopumilus
SpeciesNitrosopumilus adriaticus
Strainstrain NF5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosopumilus adriaticus strain NF5 chromosome, complete genome.

Gene Summary

Adenine Count

603095 bp

Thymine Count

597639 bp

Guanine Count

303209 bp

Cytosine Count

299147 bp

Genome Length

1803090 bp

Protein-coding Genes

2183 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fibrillarin-like rrna/trna 2'-o-methyltransferaseNADRNF5_RS02395Not AvailableNegative407605 - 40831527297.9
nop5/nop56 family proteinNADRNF5_RS02400Not AvailableNegative408266 - 40993662757.3
dihydroorotate dehydrogenaseNADRNF5_RS02405Not AvailablePositive409980 - 41093333995.2
dihydroorotate dehydrogenase electron transfer subunitNADRNF5_RS02410Not AvailablePositive410917 - 41172929701.0
b12-binding domain-containing radical sam proteinNADRNF5_RS02415Not AvailablePositive411781 - 41350565028.8
30s ribosomal protein s30eNADRNF5_RS02420Not AvailablePositive413546 - 4137286722.28
dna repair and recombination protein radaNADRNF5_RS02425Not AvailablePositive413811 - 41503144225.4
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnNADRNF5_RS02430Not AvailablePositive415125 - 41618038926.1
50s ribosomal protein l21NADRNF5_RS02435Not AvailablePositive416238 - 41653711304.9
rna polymerase rpb4NADRNF5_RS02440Not AvailablePositive416539 - 41686512535.2

Displaying genes 491 – 500 of 2227 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.