Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside hydrolase | VO01_RS03765 | Not Available | Negative | 771655 - 772590 | 32884.6 |
| adenosine deaminase | VO01_RS03770 | Not Available | Positive | 772693 - 773811 | 40193.4 |
| pts sugar transporter subunit iia | VO01_RS03775 | Not Available | Positive | 773875 - 774324 | 15474.4 |
| pts sugar transporter subunit iib | VO01_RS03780 | Not Available | Positive | 774321 - 774593 | 9291.18 |
| hypothetical protein | VO01_RS03785 | Not Available | Negative | 774542 - 775600 | 35708.1 |
| merr family transcriptional regulator | VO01_RS03790 | Not Available | Negative | 775573 - 776211 | 22196.1 |
| phospho-sugar mutase | VO01_RS03795 | Not Available | Negative | 776300 - 778003 | 60580.6 |
| purine-nucleoside phosphorylase | VO01_RS03800 | Not Available | Negative | 778000 - 778827 | 28919.6 |
| nad(p)h-quinone dehydrogenase | VO01_RS03805 | Not Available | Positive | 778918 - 780357 | 50137.9 |
| hypothetical protein | VO01_RS17030 | Not Available | Negative | 780666 - 780929 | 9385.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
