Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | VO01_RS03130 | Not Available | Negative | 630508 - 631830 | 46446.4 |
| hypothetical protein | VO01_RS03135 | Not Available | Positive | 632160 - 632363 | 7074.85 |
| sbcc/mukb-like walker b domain-containing protein | VO01_RS17725 | Not Available | Negative | 632356 - 633489 | 40033.5 |
| aaa family atpase | VO01_RS17730 | Not Available | Negative | 633486 - 635318 | 64768.0 |
| exonuclease sbccd subunit d | VO01_RS03145 | Not Available | Negative | 635318 - 636478 | 40883.6 |
| sdr family oxidoreductase | VO01_RS03150 | Not Available | Negative | 636587 - 637402 | 29107.9 |
| duf3151 domain-containing protein | VO01_RS03155 | Not Available | Positive | 637558 - 638034 | 16814.6 |
| adenylosuccinate synthase | VO01_RS03160 | Not Available | Positive | 638108 - 639397 | 46632.6 |
| hypothetical protein | VO01_RS18010 | Not Available | Positive | 639490 - 639618 | 5080.05 |
| type isp restriction/modification enzyme | VO01_RS16625 | Not Available | Positive | 639788 - 644764 | 184228.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
