Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2,3-dihydroxybenzoyl)adenylate synthase | VO01_RS01500 | Not Available | Positive | 306766 - 308475 | 58717.2 |
| 4'-phosphopantetheinyl transferase | VO01_RS01505 | Not Available | Positive | 308468 - 309166 | 23972.7 |
| salicylate synthase | VO01_RS01510 | Not Available | Positive | 309177 - 310613 | 50442.6 |
| duf2207 domain-containing protein | VO01_RS01515 | Not Available | Negative | 310625 - 312457 | 64244.1 |
| hypothetical protein | VO01_RS01520 | Not Available | Negative | 312450 - 312845 | 13510.8 |
| serine hydrolase | VO01_RS01525 | Not Available | Negative | 312882 - 314300 | 48918.2 |
| glycoside hydrolase domain-containing protein | VO01_RS01530 | Not Available | Negative | 314394 - 315656 | 44823.9 |
| phage holin family protein | VO01_RS01535 | Not Available | Negative | 315883 - 316344 | 15676.1 |
| hypothetical protein | VO01_RS01540 | Not Available | Negative | 316449 - 317054 | 20664.2 |
| hypothetical protein | VO01_RS01545 | Not Available | Negative | 317051 - 317629 | 19553.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
