Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | VO01_RS01450 | Not Available | Positive | 284011 - 285246 | 43160.1 |
| gnat family n-acetyltransferase | VO01_RS01455 | Not Available | Positive | 285243 - 286100 | 29527.4 |
| abc transporter atp-binding protein | VO01_RS01460 | Not Available | Negative | 286034 - 287776 | 59503.2 |
| abc transporter atp-binding protein | VO01_RS01465 | Not Available | Negative | 287776 - 289584 | 61640.2 |
| class i sam-dependent methyltransferase | VO01_RS01470 | Not Available | Negative | 289581 - 290339 | 27265.5 |
| thioesterase ii family protein | VO01_RS01475 | Not Available | Negative | 290336 - 291136 | 28141.5 |
| gfo/idh/moca family oxidoreductase | VO01_RS01480 | Not Available | Negative | 291234 - 293171 | 67435.6 |
| saccharopine dehydrogenase nadp-binding domain-containing protein | VO01_RS01485 | Not Available | Negative | 293168 - 294313 | 38902.2 |
| non-ribosomal peptide synthetase | VO01_RS01490 | Not Available | Negative | 294310 - 299871 | 197602.0 |
| non-ribosomal peptide synthetase | VO01_RS01495 | Not Available | Negative | 299868 - 306665 | 238391.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
