Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | VO01_RS15315 | Not Available | Negative | 3202535 - 3203416 | 31894.1 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | VO01_RS15320 | Not Available | Negative | 3203566 - 3204201 | 22848.8 |
| protein jag | VO01_RS15325 | Not Available | Negative | 3204752 - 3205282 | 18831.8 |
| membrane protein insertase yidc | VO01_RS15330 | Not Available | Negative | 3205279 - 3206241 | 35555.1 |
| membrane protein insertion efficiency factor yidd | VO01_RS15335 | Not Available | Negative | 3206252 - 3206563 | 11346.9 |
| ribonuclease p protein component | VO01_RS15340 | Not Available | Negative | 3206560 - 3206901 | 12285.1 |
| 50s ribosomal protein l34 | VO01_RS15345 | Not Available | Negative | 3206905 - 3207042 | 5210.51 |
| aaa family atpase | VO01_RS15830 | Not Available | Positive | 1 - 633 | 22787.0 |
| hypothetical protein | VO01_RS15835 | Not Available | Positive | 633 - 965 | 12211.4 |
| atp-binding protein | VO01_RS15840 | Not Available | Positive | 1413 - 2582 | 42002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
