Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | VO01_RS14315 | Not Available | Positive | 3023946 - 3024902 | 33501.1 |
| gnat family n-acetyltransferase | VO01_RS14320 | Not Available | Negative | 3024909 - 3025514 | 21216.3 |
| 50s ribosomal protein l1 | VO01_RS14325 | Not Available | Negative | 3025619 - 3026305 | 23732.5 |
| 50s ribosomal protein l11 | VO01_RS14330 | Not Available | Negative | 3026406 - 3026837 | 15046.4 |
| transcription termination/antitermination protein nusg | VO01_RS14335 | Not Available | Negative | 3026891 - 3027925 | 37495.0 |
| preprotein translocase subunit sece | VO01_RS14340 | Not Available | Negative | 3028111 - 3028383 | 10145.8 |
| Trna-trp | Not Available | Not Available | Positive | 3028468 - 3028543 | Not Available |
| pyridoxal phosphate-dependent aminotransferase | VO01_RS14350 | Not Available | Positive | 3028733 - 3029950 | 43304.2 |
| udp-n-acetylmuramate dehydrogenase | VO01_RS14355 | Not Available | Negative | 3029984 - 3031138 | 40356.8 |
| maoc/paaz c-terminal domain-containing protein | VO01_RS14360 | Not Available | Negative | 3031146 - 3031574 | 14700.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
