Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bglg family transcription antiterminator | VO01_RS17890 | Not Available | Positive | 2841874 - 2843070 | 44529.3 |
| type i methionyl aminopeptidase | VO01_RS13365 | Not Available | Negative | 2843116 - 2843952 | 29098.4 |
| adenylate kinase | VO01_RS13370 | Not Available | Negative | 2843957 - 2844559 | 21798.6 |
| preprotein translocase subunit secy | VO01_RS13375 | Not Available | Negative | 2844556 - 2845878 | 48021.6 |
| 50s ribosomal protein l15 | VO01_RS13380 | Not Available | Negative | 2846004 - 2846579 | 19982.2 |
| 50s ribosomal protein l30 | VO01_RS13385 | Not Available | Negative | 2846579 - 2846761 | 6846.28 |
| 30s ribosomal protein s5 | VO01_RS13390 | Not Available | Negative | 2846761 - 2847426 | 23057.7 |
| 50s ribosomal protein l18 | VO01_RS13395 | Not Available | Negative | 2847462 - 2847833 | 13170.8 |
| 50s ribosomal protein l6 | VO01_RS13400 | Not Available | Negative | 2847836 - 2848372 | 19002.0 |
| 30s ribosomal protein s8 | VO01_RS13405 | Not Available | Negative | 2848377 - 2848775 | 14166.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
