Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate decarboxylase acyl carrier protein | VO01_RS17495 | Not Available | Negative | 2351460 - 2351795 | 11982.0 |
| triphosphoribosyl-dephospho-coa synthase | VO01_RS11130 | Not Available | Negative | 2351795 - 2352721 | 30964.2 |
| malonate decarboxylase subunit alpha | VO01_RS11135 | Not Available | Negative | 2352718 - 2354382 | 59726.0 |
| aec family transporter | VO01_RS11140 | Not Available | Negative | 2354438 - 2355391 | 32765.4 |
| lysr family transcriptional regulator | VO01_RS11145 | Not Available | Positive | 2355477 - 2356409 | 32633.7 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | VO01_RS11150 | Not Available | Negative | 2356596 - 2357411 | 28902.7 |
| membrane protein | VO01_RS11155 | Not Available | Negative | 2357408 - 2357734 | 11083.4 |
| srpbcc family protein | VO01_RS11160 | Not Available | Negative | 2357738 - 2358292 | 19841.9 |
| maltose alpha-d-glucosyltransferase | VO01_RS11165 | Not Available | Positive | 2358382 - 2360628 | 81172.1 |
| hypothetical protein | VO01_RS11170 | Not Available | Negative | 2360669 - 2361205 | 19129.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
