Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2064 domain-containing protein | VO01_RS10830 | Not Available | Positive | 2294687 - 2295370 | 23707.1 |
| class i sam-dependent methyltransferase | VO01_RS10835 | Not Available | Positive | 2295367 - 2296065 | 24161.4 |
| hypothetical protein | VO01_RS10840 | Not Available | Negative | 2296014 - 2296493 | 16580.0 |
| molybdopterin-dependent oxidoreductase | VO01_RS10845 | Not Available | Negative | 2296493 - 2297731 | 44049.9 |
| glycosyltransferase family 87 protein | VO01_RS10850 | Not Available | Positive | 2297810 - 2299270 | 52317.7 |
| abc transporter atp-binding protein | VO01_RS10855 | Not Available | Negative | 2299271 - 2300335 | 36662.2 |
| abc transporter permease | VO01_RS10860 | Not Available | Negative | 2300332 - 2301156 | 28194.3 |
| molybdate abc transporter substrate-binding protein | VO01_RS10865 | Not Available | Negative | 2301179 - 2301952 | 25376.5 |
| molybdopterin-binding protein | VO01_RS10870 | Not Available | Negative | 2301988 - 2302503 | 17700.1 |
| gtp 3',8-cyclase moaa | VO01_RS10875 | Not Available | Positive | 2302624 - 2303682 | 38265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
