Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | VO01_RS10690 | Not Available | Negative | 2269838 - 2270005 | 5760.77 |
| hypothetical protein | VO01_RS17365 | Not Available | Negative | 2270136 - 2270309 | 6065.7 |
| hypothetical protein | VO01_RS17830 | Not Available | Negative | 2270392 - 2270937 | 18439.3 |
| molybdenum cofactor biosynthesis protein moae | VO01_RS10700 | Not Available | Negative | 2271210 - 2271641 | 15357.1 |
| molybdenum cofactor synthesis domain-containing protein | VO01_RS10705 | Not Available | Negative | 2271638 - 2272192 | 18385.8 |
| cyclic pyranopterin monophosphate synthase moac | VO01_RS10710 | Not Available | Negative | 2272189 - 2272686 | 17055.6 |
| gephyrin-like molybdotransferase glp | VO01_RS10715 | Not Available | Negative | 2272679 - 2273974 | 44142.7 |
| hypothetical protein | VO01_RS10720 | Not Available | Positive | 2274108 - 2274332 | 7373.29 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | VO01_RS10725 | Not Available | Positive | 2274427 - 2275200 | 26856.8 |
| mtap family purine nucleoside phosphorylase | VO01_RS10730 | Not Available | Positive | 2275298 - 2276227 | 32090.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
