Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyl-transferring glycine dehydrogenase | VO01_RS10195 | Not Available | Negative | 2165284 - 2168259 | 104894.0 |
| glycine cleavage system protein gcvh | VO01_RS10200 | Not Available | Negative | 2168256 - 2168627 | 12967.0 |
| glycine cleavage system aminomethyltransferase gcvt | VO01_RS10205 | Not Available | Negative | 2168624 - 2169826 | 41524.2 |
| sseb family protein | VO01_RS10210 | Not Available | Negative | 2170211 - 2170666 | 15991.6 |
| blai/meci/copy family transcriptional regulator | VO01_RS10215 | Not Available | Positive | 2170793 - 2171164 | 13119.7 |
| copper resistance protein copc | VO01_RS10220 | Not Available | Negative | 2171174 - 2171938 | 25349.3 |
| sufs family cysteine desulfurase | VO01_RS10225 | Not Available | Positive | 2172043 - 2173350 | 46192.3 |
| fe-s cluster assembly sulfur transfer protein sufu | VO01_RS10230 | Not Available | Positive | 2173347 - 2173787 | 15331.1 |
| chab family protein | VO01_RS10235 | Not Available | Positive | 2173881 - 2174276 | 14252.3 |
| gnat family n-acetyltransferase | VO01_RS10240 | Not Available | Negative | 2174295 - 2174849 | 19844.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
