Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | VO01_RS09220 | Not Available | Negative | 1943057 - 1944298 | 44926.9 |
| ornithine carbamoyltransferase | VO01_RS09225 | Not Available | Negative | 1944347 - 1945270 | 32974.1 |
| acetylornithine transaminase | VO01_RS09230 | Not Available | Negative | 1945420 - 1946637 | 42943.4 |
| acetylglutamate kinase | VO01_RS09235 | Not Available | Negative | 1946634 - 1947545 | 31836.3 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | VO01_RS09240 | Not Available | Negative | 1947569 - 1948723 | 38962.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | VO01_RS09245 | Not Available | Negative | 1948720 - 1949769 | 35969.7 |
| phenylalanine--trna ligase subunit beta | VO01_RS09250 | Not Available | Negative | 1949893 - 1952436 | 88617.8 |
| phenylalanine--trna ligase subunit alpha | VO01_RS09255 | Not Available | Negative | 1952439 - 1953476 | 38018.9 |
| amino acid abc transporter permease | VO01_RS09260 | Not Available | Negative | 1953550 - 1954374 | 29562.7 |
| amino acid abc transporter permease | VO01_RS09265 | Not Available | Negative | 1954371 - 1955018 | 22929.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
