Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | VO01_RS07220 | Not Available | Negative | 1508406 - 1509647 | 43019.8 |
| acyl carrier protein | VO01_RS07225 | Not Available | Negative | 1509727 - 1509975 | 8857.33 |
| beta-ketoacyl-acp synthase iii | VO01_RS07230 | Not Available | Negative | 1510029 - 1511042 | 35258.0 |
| acp s-malonyltransferase | VO01_RS07235 | Not Available | Negative | 1511073 - 1511993 | 31190.4 |
| pucr family transcriptional regulator | VO01_RS07240 | Not Available | Negative | 1512088 - 1513362 | 45997.8 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | VO01_RS07245 | Not Available | Negative | 1513379 - 1516105 | 100960.0 |
| peroxiredoxin | VO01_RS07250 | Not Available | Positive | 1516347 - 1516820 | 17498.8 |
| hypothetical protein | VO01_RS07255 | Not Available | Negative | 1516839 - 1517528 | 24349.8 |
| Trna-val | Not Available | Not Available | Positive | 1517621 - 1517693 | Not Available |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | VO01_RS07265 | Not Available | Negative | 1517794 - 1518381 | 20666.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
