Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VO01_RS00175 | Not Available | Positive | 34616 - 34801 | 6513.98 |
| alpha/beta fold hydrolase | VO01_RS00180 | Not Available | Negative | 34798 - 35850 | 38050.7 |
| voc family protein | VO01_RS00185 | Not Available | Negative | 35946 - 36338 | 14250.5 |
| sugar phosphate isomerase/epimerase family protein | VO01_RS00190 | Not Available | Positive | 36579 - 37385 | 28853.6 |
| gfo/idh/moca family protein | VO01_RS00195 | Not Available | Positive | 37382 - 38491 | 38370.2 |
| alpha/beta fold hydrolase | VO01_RS00200 | Not Available | Positive | 38583 - 39314 | 25531.7 |
| heat repeat domain-containing protein | VO01_RS00205 | Not Available | Positive | 39311 - 40024 | 25524.5 |
| merr family transcriptional regulator | VO01_RS00210 | Not Available | Positive | 40047 - 41000 | 34058.3 |
| dienelactone hydrolase family protein | VO01_RS00215 | Not Available | Positive | 41099 - 41725 | 21927.1 |
| hypothetical protein | VO01_RS16950 | Not Available | Positive | 42103 - 42483 | 14089.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
