Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain R1-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid
Gene Summary
Adenine Count
7938 bp
Thymine Count
7426 bp
Guanine Count
15813 bp
Cytosine Count
16513 bp
Genome Length
47690 bp
Protein-coding Genes
48 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division atp-binding protein ftse | VO01_RS05495 | Not Available | Positive | 1136328 - 1137962 | 57350.5 |
| permease-like cell division protein ftsx | VO01_RS05500 | Not Available | Positive | 1137959 - 1138876 | 33248.5 |
| ssra-binding protein smpb | VO01_RS05505 | Not Available | Positive | 1138943 - 1139419 | 18211.8 |
| Tmrna,resume consensus sequence (at 87): tacaactgccaataacaa | Not Available | Not Available | Positive | 1139563 - 1139938 | Not Available |
| abc transporter permease | VO01_RS05515 | Not Available | Negative | 1140038 - 1141849 | 65052.1 |
| abc transporter atp-binding protein | VO01_RS05520 | Not Available | Negative | 1141852 - 1142880 | 36960.1 |
| extracellular solute-binding protein | VO01_RS05525 | Not Available | Negative | 1142880 - 1143962 | 38001.0 |
| mfs transporter | VO01_RS05530 | Not Available | Positive | 1144313 - 1145704 | 48004.8 |
| inositol monophosphatase family protein | VO01_RS05535 | Not Available | Negative | 1145735 - 1146547 | 29089.0 |
| ribosome small subunit-dependent gtpase a | VO01_RS05540 | Not Available | Negative | 1146558 - 1147634 | 38529.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
