Pseudoalteromonas tetraodonis strain GFC

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tetraodonis strain GFC is characterized as a rod-shaped bacterium. It possesses two replicons, which can influence its genetic variability and adaptability in various environments. The strain is cataloged under two specific accession numbers: NZ_CP011042.1 and NZ_CP011041.1, which provide reference points for its genomic sequencing and related research. The genus Pseudoalteromonas is known for its ecological versatility and is often found in marine environments, suggesting that P. tetraodonis may play a role in the microbial dynamics of oceanic ecosystems. The dual replicon structure could enable the strain to efficiently manage its genetic resources, potentially aiding in the acquisition of metabolic pathways that are advantageous in fluctuating marine conditions. This strain may contribute to biogeochemical cycles in its habitat, as many Pseudoalteromonas species are known for their ability to degrade organic materials and synthesize bioactive compounds. Understanding the traits of P. tetraodonis strain GFC can enhance our knowledge of microbial interactions in marine environments, as well as the ecological functions that these bacteria perform.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tetraodonis
Strainstrain GFC

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tetraodonis strain GFC chromosome II, complete

Gene Summary

Adenine Count

218767 bp

Thymine Count

221204 bp

Guanine Count

150725 bp

Cytosine Count

138561 bp

Genome Length

729257 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylase domain-containing proteinPTET_RS18680Not AvailablePositive662321 - 66333738707.1
gbsr/marr family transcriptional regulatorPTET_RS18685Not AvailableNegative663385 - 66393320820.3
alcohol dehydrogenase adhpPTET_RS18690Not AvailablePositive664150 - 66516035827.6
tonb-dependent receptorPTET_RS18695Not AvailableNegative665211 - 66763189700.4
metal-dependent hydrolase family proteinPTET_RS18700Not AvailableNegative667926 - 66919745620.0
duf885 domain-containing proteinPTET_RS18705Not AvailablePositive669357 - 67117468377.7
ycgn family cysteine cluster proteinPTET_RS18710Not AvailablePositive671271 - 67178319749.2
rna methyltransferasePTET_RS18715Not AvailablePositive671783 - 67229818702.4
m1 family metallopeptidasePTET_RS18720Not AvailablePositive672495 - 67413862177.9
methyl-accepting chemotaxis proteinPTET_RS18725Not AvailablePositive674376 - 67626568664.2

Displaying genes 561 – 570 of 3637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.