Pseudoalteromonas tetraodonis strain GFC

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tetraodonis strain GFC is characterized as a rod-shaped bacterium. It possesses two replicons, which can influence its genetic variability and adaptability in various environments. The strain is cataloged under two specific accession numbers: NZ_CP011042.1 and NZ_CP011041.1, which provide reference points for its genomic sequencing and related research. The genus Pseudoalteromonas is known for its ecological versatility and is often found in marine environments, suggesting that P. tetraodonis may play a role in the microbial dynamics of oceanic ecosystems. The dual replicon structure could enable the strain to efficiently manage its genetic resources, potentially aiding in the acquisition of metabolic pathways that are advantageous in fluctuating marine conditions. This strain may contribute to biogeochemical cycles in its habitat, as many Pseudoalteromonas species are known for their ability to degrade organic materials and synthesize bioactive compounds. Understanding the traits of P. tetraodonis strain GFC can enhance our knowledge of microbial interactions in marine environments, as well as the ecological functions that these bacteria perform.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tetraodonis
Strainstrain GFC

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tetraodonis strain GFC chromosome II, complete

Gene Summary

Adenine Count

218767 bp

Thymine Count

221204 bp

Guanine Count

150725 bp

Cytosine Count

138561 bp

Genome Length

729257 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps assembly protein lptdPTET_RS13670Not AvailablePositive2925446 - 292769284857.6
peptidylprolyl isomerase suraPTET_RS13675Not AvailablePositive2927789 - 292908448359.7
4-hydroxythreonine-4-phosphate dehydrogenase pdxaPTET_RS13680Not AvailablePositive2929087 - 293007935505.8
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaPTET_RS13685Not AvailablePositive2930076 - 293088230174.8
co2+/mg2+ efflux protein apagPTET_RS13690Not AvailablePositive2930866 - 293125514178.8
symmetrical bis(5'-nucleosyl)-tetraphosphatasePTET_RS13695Not AvailablePositive2931271 - 293208931135.9
methyl-accepting chemotaxis proteinPTET_RS13700Not AvailablePositive2932394 - 293440972926.2
50s ribosomal protein l33PTET_RS13705Not AvailableNegative2934766 - 29349216073.57
50s ribosomal protein l28PTET_RS13710Not AvailableNegative2934933 - 29351699046.11
radc family proteinPTET_RS13715Not AvailableNegative2935442 - 293611624875.2

Displaying genes 3221 – 3230 of 3637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.