Pseudoalteromonas tetraodonis strain GFC

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tetraodonis strain GFC is characterized as a rod-shaped bacterium. It possesses two replicons, which can influence its genetic variability and adaptability in various environments. The strain is cataloged under two specific accession numbers: NZ_CP011042.1 and NZ_CP011041.1, which provide reference points for its genomic sequencing and related research. The genus Pseudoalteromonas is known for its ecological versatility and is often found in marine environments, suggesting that P. tetraodonis may play a role in the microbial dynamics of oceanic ecosystems. The dual replicon structure could enable the strain to efficiently manage its genetic resources, potentially aiding in the acquisition of metabolic pathways that are advantageous in fluctuating marine conditions. This strain may contribute to biogeochemical cycles in its habitat, as many Pseudoalteromonas species are known for their ability to degrade organic materials and synthesize bioactive compounds. Understanding the traits of P. tetraodonis strain GFC can enhance our knowledge of microbial interactions in marine environments, as well as the ecological functions that these bacteria perform.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tetraodonis
Strainstrain GFC

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tetraodonis strain GFC chromosome II, complete

Gene Summary

Adenine Count

218767 bp

Thymine Count

221204 bp

Guanine Count

150725 bp

Cytosine Count

138561 bp

Genome Length

729257 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate dehydrogenase e1 componentPTET_RS08315Not AvailableNegative1799596 - 1802415105157.0
succinate dehydrogenase iron-sulfur subunitPTET_RS08320Not AvailableNegative1802503 - 180321926618.0
succinate dehydrogenase flavoprotein subunitPTET_RS08325Not AvailableNegative1803230 - 180500264484.2
succinate dehydrogenase, hydrophobic membrane anchor proteinPTET_RS08330Not AvailableNegative1805003 - 180535012733.1
succinate dehydrogenase, cytochrome b556 subunitPTET_RS08335Not AvailableNegative1805341 - 180571813764.9
citrate synthasePTET_RS08340Not AvailablePositive1806125 - 180741147682.1
aminotransferase class v-fold plp-dependent enzymePTET_RS08345Not AvailablePositive1807523 - 180874944372.9
sufe family proteinPTET_RS08350Not AvailablePositive1808762 - 180917815229.6
trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcdaPTET_RS08355Not AvailableNegative1809215 - 181001229115.0
tigr01621 family pseudouridine synthasePTET_RS08360Not AvailableNegative1810013 - 181069325844.1

Displaying genes 2211 – 2220 of 3637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.