Pseudoalteromonas tetraodonis strain GFC

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tetraodonis strain GFC is characterized as a rod-shaped bacterium. It possesses two replicons, which can influence its genetic variability and adaptability in various environments. The strain is cataloged under two specific accession numbers: NZ_CP011042.1 and NZ_CP011041.1, which provide reference points for its genomic sequencing and related research. The genus Pseudoalteromonas is known for its ecological versatility and is often found in marine environments, suggesting that P. tetraodonis may play a role in the microbial dynamics of oceanic ecosystems. The dual replicon structure could enable the strain to efficiently manage its genetic resources, potentially aiding in the acquisition of metabolic pathways that are advantageous in fluctuating marine conditions. This strain may contribute to biogeochemical cycles in its habitat, as many Pseudoalteromonas species are known for their ability to degrade organic materials and synthesize bioactive compounds. Understanding the traits of P. tetraodonis strain GFC can enhance our knowledge of microbial interactions in marine environments, as well as the ecological functions that these bacteria perform.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tetraodonis
Strainstrain GFC

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tetraodonis strain GFC chromosome II, complete

Gene Summary

Adenine Count

218767 bp

Thymine Count

221204 bp

Guanine Count

150725 bp

Cytosine Count

138561 bp

Genome Length

729257 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPTET_RS16850Not AvailableNegative246370 - 24690020338.2
duf1294 domain-containing proteinPTET_RS16855Not AvailablePositive246952 - 24731714160.6
pega domain-containing proteinPTET_RS16860Not AvailableNegative247365 - 24770912499.0
serine/threonine-protein kinasePTET_RS16865Not AvailableNegative247886 - 24985974057.1
type vi secretion system-associated fha domain protein taghPTET_RS16870Not AvailablePositive250253 - 25152446979.9
type vi secretion system lipoprotein tssjPTET_RS16875Not AvailablePositive251540 - 25200417712.4
type vi secretion system baseplate subunit tsskPTET_RS16880Not AvailablePositive252020 - 25334848893.8
type vi secretion system protein tssl, long formPTET_RS16885Not AvailablePositive253371 - 25465147549.2
type vi secretion system membrane subunit tssmPTET_RS16890Not AvailablePositive254662 - 258171133354.0
type vi secretion system-associated protein tagfPTET_RS16895Not AvailablePositive258153 - 25888127170.2

Displaying genes 201 – 210 of 3637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.