Pseudoalteromonas tetraodonis strain GFC

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tetraodonis strain GFC is characterized as a rod-shaped bacterium. It possesses two replicons, which can influence its genetic variability and adaptability in various environments. The strain is cataloged under two specific accession numbers: NZ_CP011042.1 and NZ_CP011041.1, which provide reference points for its genomic sequencing and related research. The genus Pseudoalteromonas is known for its ecological versatility and is often found in marine environments, suggesting that P. tetraodonis may play a role in the microbial dynamics of oceanic ecosystems. The dual replicon structure could enable the strain to efficiently manage its genetic resources, potentially aiding in the acquisition of metabolic pathways that are advantageous in fluctuating marine conditions. This strain may contribute to biogeochemical cycles in its habitat, as many Pseudoalteromonas species are known for their ability to degrade organic materials and synthesize bioactive compounds. Understanding the traits of P. tetraodonis strain GFC can enhance our knowledge of microbial interactions in marine environments, as well as the ecological functions that these bacteria perform.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tetraodonis
Strainstrain GFC

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tetraodonis strain GFC chromosome II, complete

Gene Summary

Adenine Count

218767 bp

Thymine Count

221204 bp

Guanine Count

150725 bp

Cytosine Count

138561 bp

Genome Length

729257 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide biosynthesis/export family proteinPTET_RS06700Not AvailablePositive1441765 - 144228619046.0
gumc family proteinPTET_RS06705Not AvailablePositive1442311 - 144451882288.1
tyrosine-protein phosphatasePTET_RS06710Not AvailablePositive1444531 - 144525926894.6
vpsp family polysaccharide biosynthesis proteinPTET_RS06715Not AvailablePositive1445252 - 144596526952.6
16s rrna (cytosine(1407)-c(5))-methyltransferase rsmfPTET_RS06720Not AvailableNegative1447141 - 144858053419.8
gntr family transcriptional regulatorPTET_RS06725Not AvailablePositive1448844 - 144955726975.4
methylisocitrate lyasePTET_RS06730Not AvailablePositive1449677 - 145055531691.6
2-methylcitrate synthasePTET_RS06735Not AvailablePositive1450581 - 145170841394.4
fe/s-dependent 2-methylisocitrate dehydratase acndPTET_RS06740Not AvailablePositive1451822 - 145443195252.0
2-methylaconitate cis-trans isomerase prpfPTET_RS06745Not AvailablePositive1454444 - 145561941014.0

Displaying genes 1891 – 1900 of 3637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.