Psychromicrobium lacuslunae strain IHBB 11108

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Psychromicrobium

Description

Psychromicrobium lacuslunae strain IHBB 11108 is a notable psychrophilic bacterium characterized by its adaptation to cold environments. This strain is distinguished by having two replicons, which are essential for its genetic stability and adaptability. The strain's genomic information is accessible through two specific accession numbers: NZ_CP011005.1 and NZ_CP011006.1, which provide insights into its genetic makeup and potential functions. The presence of multiple replicons in Psychromicrobium lacuslunae strain IHBB 11108 may confer advantages in its cold habitats by allowing for flexible gene regulation and enhanced metabolic capabilities. Such adaptations enable the organism to thrive in environments with low temperatures, which can be critical for survival and competitiveness in niche ecological settings. In summary, Psychromicrobium lacuslunae strain IHBB 11108 exemplifies the resilience of microorganisms in extreme conditions. Its dual-replicon system may play a significant role in its ecological success in cold environments, highlighting the importance of genetic diversity and adaptability in microbial life. Understanding the genomic characteristics of this strain can provide valuable insights into the ecological dynamics of psychrophilic bacteria in their natural habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusPsychromicrobium
SpeciesPsychromicrobium lacuslunae
Strainstrain IHBB 11108

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychromicrobium lacuslunae strain IHBB 11108 chromosome, complete

Gene Summary

Adenine Count

737814 bp

Thymine Count

737104 bp

Guanine Count

1060521 bp

Cytosine Count

1060279 bp

Genome Length

3595718 bp

Protein-coding Genes

3301 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crossover junction endodeoxyribonuclease ruvcUM93_RS04530Not AvailablePositive982207 - 98279420584.9
holliday junction branch migration protein ruvaUM93_RS04535Not AvailablePositive982879 - 98353222829.6
holliday junction branch migration dna helicase ruvbUM93_RS04540Not AvailablePositive983525 - 98464340125.3
preprotein translocase subunit yajcUM93_RS04545Not AvailablePositive984780 - 98521415667.4
protein translocase subunit secdUM93_RS04550Not AvailablePositive985325 - 98710962507.2
protein translocase subunit secfUM93_RS04555Not AvailablePositive987109 - 98813736729.9
rela/spot family proteinUM93_RS04560Not AvailablePositive988384 - 99065184610.2
hypothetical proteinUM93_RS04565Not AvailableNegative990662 - 99128222706.8
duf349 domain-containing proteinUM93_RS04570Not AvailableNegative991385 - 99307060363.7
peptidylprolyl isomeraseUM93_RS04575Not AvailableNegative993099 - 99389927522.7

Displaying genes 971 – 980 of 3395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.