Psychromicrobium lacuslunae strain IHBB 11108

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Psychromicrobium

Description

Psychromicrobium lacuslunae strain IHBB 11108 is a notable psychrophilic bacterium characterized by its adaptation to cold environments. This strain is distinguished by having two replicons, which are essential for its genetic stability and adaptability. The strain's genomic information is accessible through two specific accession numbers: NZ_CP011005.1 and NZ_CP011006.1, which provide insights into its genetic makeup and potential functions. The presence of multiple replicons in Psychromicrobium lacuslunae strain IHBB 11108 may confer advantages in its cold habitats by allowing for flexible gene regulation and enhanced metabolic capabilities. Such adaptations enable the organism to thrive in environments with low temperatures, which can be critical for survival and competitiveness in niche ecological settings. In summary, Psychromicrobium lacuslunae strain IHBB 11108 exemplifies the resilience of microorganisms in extreme conditions. Its dual-replicon system may play a significant role in its ecological success in cold environments, highlighting the importance of genetic diversity and adaptability in microbial life. Understanding the genomic characteristics of this strain can provide valuable insights into the ecological dynamics of psychrophilic bacteria in their natural habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusPsychromicrobium
SpeciesPsychromicrobium lacuslunae
Strainstrain IHBB 11108

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychromicrobium lacuslunae strain IHBB 11108 chromosome, complete

Gene Summary

Adenine Count

737814 bp

Thymine Count

737104 bp

Guanine Count

1060521 bp

Cytosine Count

1060279 bp

Genome Length

3595718 bp

Protein-coding Genes

3301 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcUM93_RS08170Not AvailableNegative1759928 - 176022410484.3
gnat family n-acetyltransferaseUM93_RS08175Not AvailableNegative1760349 - 176085818791.4
diacylglycerol/lipid kinase family proteinUM93_RS08180Not AvailableNegative1760858 - 176179933419.4
j domain-containing proteinUM93_RS08185Not AvailablePositive1761901 - 176279431980.2
trna (cytidine(34)-2'-o)-methyltransferaseUM93_RS08190Not AvailablePositive1762946 - 176341317191.6
class i sam-dependent methyltransferaseUM93_RS08195Not AvailablePositive1763410 - 176425529980.9
class i sam-dependent methyltransferaseUM93_RS08200Not AvailablePositive1764273 - 176507028108.4
ecf rna polymerase sigma factor sigkUM93_RS08205Not AvailablePositive1765245 - 176583521914.7
anti-sigma factorUM93_RS08210Not AvailablePositive1765837 - 176673030858.2
merr family transcriptional regulatorUM93_RS08215Not AvailablePositive1766855 - 176761928889.2

Displaying genes 1691 – 1700 of 3395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.