Pseudomonas sp. MRSN 12121 strain MRSN12121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MRSN 12121 is characterized by having two replicons, which play a critical role in its genetic organization and replication. The strain is identified by its specific accessions, NZ_CP010892.1 and NZ_CP010894.1, which are associated with its genomic sequences. These replicons can influence the strain's adaptability and metabolic capabilities, traits often observed in the Pseudomonas genus. Pseudomonas species are known for their environmental versatility and are frequently found in soil, water, and as opportunistic pathogens in humans and plants. The presence of two replicons may contribute to the strain's ability to acquire and maintain diverse genetic traits, allowing it to thrive in various ecological niches. This genetic flexibility is often linked to the strain's potential for bioremediation, as many Pseudomonas species are capable of degrading pollutants. In conclusion, the genomic structure of Pseudomonas sp. MRSN 12121, indicated by its two replicons and specific accessions, suggests that it may possess advantageous traits for adaptation in diverse environments. This adaptability underscores the ecological significance of Pseudomonas species in biogeochemical cycles and their potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MRSN 12121
Strainstrain MRSN12121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MRSN 12121 strain MRSN12121
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MRSN 12121 strain MRSN12121 plasmid unnamed,

Gene Summary

Adenine Count

3812 bp

Thymine Count

4049 bp

Guanine Count

6696 bp

Cytosine Count

6564 bp

Genome Length

21121 bp

Protein-coding Genes

24 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box proteinTO66_RS28420Not AvailableNegative6226952 - 622934589680.1
alpha/beta hydrolase family proteinTO66_RS28425Not AvailablePositive6229418 - 623041335321.5
terb family tellurite resistance proteinTO66_RS28430Not AvailableNegative6230477 - 623124128332.2
n-acetylmuramate alpha-1-phosphate uridylyltransferase muruTO66_RS28435Not AvailableNegative6231243 - 623191724418.6
aminoglycoside phosphotransferase family proteinTO66_RS28440Not AvailableNegative6231914 - 623293938636.5
lps-assembly protein lptdTO66_RS28445Not AvailablePositive6233070 - 6235895106431.0
peptidylprolyl isomerase suraTO66_RS28450Not AvailablePositive6235876 - 623719248834.2
4-hydroxythreonine-4-phosphate dehydrogenase pdxaTO66_RS28455Not AvailablePositive6237189 - 623817835244.8
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaTO66_RS28460Not AvailablePositive6238175 - 623899329868.9
co2+/mg2+ efflux protein apagTO66_RS28465Not AvailablePositive6239117 - 623949713742.3

Displaying genes 5921 – 5930 of 6540 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.