Pseudomonas sp. MRSN 12121 strain MRSN12121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MRSN 12121 is characterized by having two replicons, which play a critical role in its genetic organization and replication. The strain is identified by its specific accessions, NZ_CP010892.1 and NZ_CP010894.1, which are associated with its genomic sequences. These replicons can influence the strain's adaptability and metabolic capabilities, traits often observed in the Pseudomonas genus. Pseudomonas species are known for their environmental versatility and are frequently found in soil, water, and as opportunistic pathogens in humans and plants. The presence of two replicons may contribute to the strain's ability to acquire and maintain diverse genetic traits, allowing it to thrive in various ecological niches. This genetic flexibility is often linked to the strain's potential for bioremediation, as many Pseudomonas species are capable of degrading pollutants. In conclusion, the genomic structure of Pseudomonas sp. MRSN 12121, indicated by its two replicons and specific accessions, suggests that it may possess advantageous traits for adaptation in diverse environments. This adaptability underscores the ecological significance of Pseudomonas species in biogeochemical cycles and their potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MRSN 12121
Strainstrain MRSN12121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MRSN 12121 strain MRSN12121
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MRSN 12121 strain MRSN12121 plasmid unnamed,

Gene Summary

Adenine Count

3812 bp

Thymine Count

4049 bp

Guanine Count

6696 bp

Cytosine Count

6564 bp

Genome Length

21121 bp

Protein-coding Genes

24 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bambTO66_RS25265Not AvailableNegative5575318 - 557646940884.6
tetratricopeptide repeat proteinTO66_RS25270Not AvailableNegative5576462 - 557710322813.8
histidine--trna ligaseTO66_RS25275Not AvailableNegative5577144 - 557843347897.5
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseTO66_RS25280Not AvailableNegative5578471 - 557958039749.1
rodz domain-containing proteinTO66_RS25285Not AvailableNegative5579584 - 558060034746.1
type iv pilus biogenesis/stability protein pilwTO66_RS25290Not AvailableNegative5580600 - 558135828788.3
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnTO66_RS25295Not AvailableNegative5581371 - 558251942229.0
nucleoside-diphosphate kinaseTO66_RS25300Not AvailableNegative5582550 - 558297515013.8
fe-s cluster assembly protein iscxTO66_RS25305Not AvailableNegative5583070 - 55832707490.87
isc system 2fe-2s type ferredoxinTO66_RS25310Not AvailableNegative5583285 - 558362612256.4

Displaying genes 5281 – 5290 of 6540 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.