Pseudomonas sp. MRSN 12121 strain MRSN12121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MRSN 12121 is characterized by having two replicons, which play a critical role in its genetic organization and replication. The strain is identified by its specific accessions, NZ_CP010892.1 and NZ_CP010894.1, which are associated with its genomic sequences. These replicons can influence the strain's adaptability and metabolic capabilities, traits often observed in the Pseudomonas genus. Pseudomonas species are known for their environmental versatility and are frequently found in soil, water, and as opportunistic pathogens in humans and plants. The presence of two replicons may contribute to the strain's ability to acquire and maintain diverse genetic traits, allowing it to thrive in various ecological niches. This genetic flexibility is often linked to the strain's potential for bioremediation, as many Pseudomonas species are capable of degrading pollutants. In conclusion, the genomic structure of Pseudomonas sp. MRSN 12121, indicated by its two replicons and specific accessions, suggests that it may possess advantageous traits for adaptation in diverse environments. This adaptability underscores the ecological significance of Pseudomonas species in biogeochemical cycles and their potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MRSN 12121
Strainstrain MRSN12121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MRSN 12121 strain MRSN12121
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MRSN 12121 strain MRSN12121 plasmid unnamed,

Gene Summary

Adenine Count

3812 bp

Thymine Count

4049 bp

Guanine Count

6696 bp

Cytosine Count

6564 bp

Genome Length

21121 bp

Protein-coding Genes

24 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate porinTO66_RS17370Not AvailablePositive3860577 - 386187846978.0
gmc family oxidoreductaseTO66_RS17375Not AvailablePositive3861911 - 386359060889.9
bifunctional helix-turn-helix transcriptional regulator/gnat family n-acetyltransferaseTO66_RS17380Not AvailablePositive3863808 - 386478235475.4
duf1176 domain-containing proteinTO66_RS17385Not AvailableNegative3864789 - 386588639589.9
4-hydroxyphenylacetate catabolism regulatory protein hpaaTO66_RS17390Not AvailableNegative3865959 - 386687034665.4
fumarylacetoacetate hydrolase family proteinTO66_RS17395Not AvailablePositive3867088 - 386775924306.2
fumarylacetoacetate hydrolase family proteinTO66_RS17400Not AvailablePositive3867769 - 386856929593.0
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseTO66_RS17405Not AvailablePositive3868570 - 387003052738.2
3,4-dihydroxyphenylacetate 2,3-dioxygenaseTO66_RS17410Not AvailablePositive3870098 - 387095531812.9
5-carboxymethyl-2-hydroxymuconate delta-isomeraseTO66_RS17415Not AvailablePositive3871090 - 387147914552.4

Displaying genes 3851 – 3860 of 6540 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.