Pseudomonas sp. MRSN 12121 strain MRSN12121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MRSN 12121 is characterized by having two replicons, which play a critical role in its genetic organization and replication. The strain is identified by its specific accessions, NZ_CP010892.1 and NZ_CP010894.1, which are associated with its genomic sequences. These replicons can influence the strain's adaptability and metabolic capabilities, traits often observed in the Pseudomonas genus. Pseudomonas species are known for their environmental versatility and are frequently found in soil, water, and as opportunistic pathogens in humans and plants. The presence of two replicons may contribute to the strain's ability to acquire and maintain diverse genetic traits, allowing it to thrive in various ecological niches. This genetic flexibility is often linked to the strain's potential for bioremediation, as many Pseudomonas species are capable of degrading pollutants. In conclusion, the genomic structure of Pseudomonas sp. MRSN 12121, indicated by its two replicons and specific accessions, suggests that it may possess advantageous traits for adaptation in diverse environments. This adaptability underscores the ecological significance of Pseudomonas species in biogeochemical cycles and their potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MRSN 12121
Strainstrain MRSN12121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MRSN 12121 strain MRSN12121
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MRSN 12121 strain MRSN12121 plasmid unnamed,

Gene Summary

Adenine Count

3812 bp

Thymine Count

4049 bp

Guanine Count

6696 bp

Cytosine Count

6564 bp

Genome Length

21121 bp

Protein-coding Genes

24 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isochorismate synthaseTO66_RS17025Not AvailablePositive3775440 - 377683751166.1
pyridoxamine 5'-phosphate oxidase family proteinTO66_RS17030Not AvailableNegative3777076 - 377808637040.9
lytic polysaccharide monooxygenase auxiliary activity family 9 proteinTO66_RS17035Not AvailableNegative3778124 - 377875923448.7
lysr substrate-binding domain-containing proteinTO66_RS17040Not AvailablePositive3779137 - 378004833612.5
abc transporter substrate-binding proteinTO66_RS17045Not AvailableNegative3780232 - 378127237705.8
aspartate aminotransferase family proteinTO66_RS17050Not AvailableNegative3781328 - 378271050827.9
apc family permeaseTO66_RS17055Not AvailableNegative3782707 - 378414350545.7
aldehyde dehydrogenaseTO66_RS17060Not AvailableNegative3784242 - 378575954537.1
acetylornithine deacetylaseTO66_RS17065Not AvailableNegative3785752 - 378691540914.2
duf1028 domain-containing proteinTO66_RS17070Not AvailableNegative3786908 - 378758223276.6

Displaying genes 3781 – 3790 of 6540 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.