Pseudomonas sp. MRSN 12121 strain MRSN12121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MRSN 12121 is characterized by having two replicons, which play a critical role in its genetic organization and replication. The strain is identified by its specific accessions, NZ_CP010892.1 and NZ_CP010894.1, which are associated with its genomic sequences. These replicons can influence the strain's adaptability and metabolic capabilities, traits often observed in the Pseudomonas genus. Pseudomonas species are known for their environmental versatility and are frequently found in soil, water, and as opportunistic pathogens in humans and plants. The presence of two replicons may contribute to the strain's ability to acquire and maintain diverse genetic traits, allowing it to thrive in various ecological niches. This genetic flexibility is often linked to the strain's potential for bioremediation, as many Pseudomonas species are capable of degrading pollutants. In conclusion, the genomic structure of Pseudomonas sp. MRSN 12121, indicated by its two replicons and specific accessions, suggests that it may possess advantageous traits for adaptation in diverse environments. This adaptability underscores the ecological significance of Pseudomonas species in biogeochemical cycles and their potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MRSN 12121
Strainstrain MRSN12121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MRSN 12121 strain MRSN12121
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MRSN 12121 strain MRSN12121 plasmid unnamed,

Gene Summary

Adenine Count

3812 bp

Thymine Count

4049 bp

Guanine Count

6696 bp

Cytosine Count

6564 bp

Genome Length

21121 bp

Protein-coding Genes

24 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoacid dehydrogenase subunit betaTO66_RS12345Not AvailableNegative2677619 - 267867738567.0
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alphaTO66_RS12350Not AvailableNegative2678679 - 267991445141.9
bkd operon transcriptional regulator bkdrTO66_RS12355Not AvailablePositive2680112 - 268060018218.3
diaminopimelate epimeraseTO66_RS12360Not AvailableNegative2680731 - 268152528252.9
mfs transporterTO66_RS12365Not AvailablePositive2681805 - 268347859907.7
hlyd family secretion proteinTO66_RS12370Not AvailablePositive2683475 - 268462341047.9
copper homeostasis membrane protein copdTO66_RS12375Not AvailableNegative2684819 - 268567930601.1
copper homeostasis periplasmic binding protein copcTO66_RS12380Not AvailableNegative2685683 - 268604512311.6
acetyltransferaseTO66_RS12385Not AvailableNegative2686137 - 268657716608.7
tetr/acrr family transcriptional regulatorTO66_RS12390Not AvailablePositive2686815 - 268743523427.1

Displaying genes 2871 – 2880 of 6540 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.