Desulfuromonas soudanensis strain WTL

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Desulfuromonadaceae

Genus

Desulfuromonas

Description

Desulfuromonas soudanensis strain WTL is a bacterial species isolated from the underground Soudan iron mine, indicating its adaptation to a unique subterranean environment. This strain exhibits a singular replicon, suggesting a streamlined genomic organization that may contribute to its survival in the specific conditions of the mine. The strain has been assigned the accession number NZ_CP010802.1, which provides a reference for genetic and genomic studies. This accession serves as a crucial identifier for researchers interested in examining the genetic makeup, metabolic pathways, and ecological roles of D. soudanensis. As a member of the Desulfuromonas genus, D. soudanensis is likely involved in sulfur metabolism, which is essential in biogeochemical cycles, particularly in anaerobic environments such as iron mines. Its ability to thrive in such habitats may have implications for bioremediation strategies, particularly in systems where sulfur compounds are prevalent. Furthermore, understanding the metabolic capabilities of this strain could provide insights into its potential applications in environmental microbiology, such as in the bioconversion of sulfur-rich substrates or in the bioleaching of metals. In summary, Desulfuromonas soudanensis strain WTL exemplifies microbial life adapted to extreme underground environments, with its unique ecological niche potentially influencing local biogeochemical processes involving sulfur.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilyDesulfuromonadaceae
GenusDesulfuromonas
SpeciesDesulfuromonas soudanensis
Strainstrain WTL

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatunderground Soudan iron mine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfuromonas soudanensis strain WTL chromosome, complete genome.

Gene Summary

Adenine Count

768633 bp

Thymine Count

767660 bp

Guanine Count

1207030 bp

Cytosine Count

1215297 bp

Genome Length

3958620 bp

Protein-coding Genes

3528 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c biogenesis protein resbDSOUD_RS14505Not AvailableNegative3234323 - 323568750799.2
5-(carboxyamino)imidazole ribonucleotide mutaseDSOUD_RS14510Not AvailableNegative3236117 - 323664118035.0
phosphoribosylamine--glycine ligaseDSOUD_RS14515Not AvailableNegative3236796 - 323806744404.4
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseDSOUD_RS14520Not AvailableNegative3238282 - 323984756015.2
askha domain-containing proteinDSOUD_RS14525Not AvailableNegative3239926 - 324115842351.5
alanine racemaseDSOUD_RS14530Not AvailableNegative3241178 - 324234741834.5
coot family nickel-binding proteinDSOUD_RS14535Not AvailablePositive3242504 - 32426896585.07
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseDSOUD_RS14540Not AvailablePositive3243151 - 324460249527.7
phosphomethylpyrimidine synthase thicDSOUD_RS14545Not AvailablePositive3244678 - 324598246971.5
cytochrome c3 family proteinDSOUD_RS14550Not AvailableNegative3246144 - 324863387281.9

Displaying genes 2971 – 2980 of 3613 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.