Phaeobacter piscinae strain P13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter piscinae strain P13 is a Gram-negative, rod-shaped bacterium isolated from a turbot rearing facility. This organism is notable for its unique genomic structure, possessing a total of four replicons, which may contribute to its adaptability and survival in aquaculture environments. The habitat from which P. piscinae strain P13 was obtained highlights its potential role in marine aquaculture, specifically in the rearing of turbot, a species of flatfish. The presence of this bacterium in a controlled aquaculture setting suggests that it may play a role in the microbial dynamics of such environments, possibly influencing water quality or interacting with other microbial communities. With accessions NZ_CP010771.1, NZ_CP010773.1, NZ_CP010774.1, and NZ_CP010768.1, the genomic data for Phaeobacter piscinae strain P13 can be further explored to understand its metabolic capabilities and ecological functions. The presence of multiple replicons may also indicate a complex regulatory system that could enhance its resilience and functional versatility in the aquatic ecosystem. In summary, Phaeobacter piscinae strain P13 exemplifies the microbial diversity present in aquaculture facilities. Its characteristics and genomic configuration suggest that it may have significant implications for the health and management of turbot populations, as well as the broader ecological interactions within marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter piscinae
Strainstrain P13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatturbot rearing facility
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter piscinae strain P13 plasmid pP13_f, complete sequence.

Gene Summary

Adenine Count

12618 bp

Thymine Count

12719 bp

Guanine Count

22451 bp

Cytosine Count

21417 bp

Genome Length

69205 bp

Protein-coding Genes

49 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoacid dehydrogenase subunit betaPhaeoP13_RS19705Not AvailableNegative42064 - 4305935770.3
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaPhaeoP13_RS19710Not AvailableNegative43070 - 4406536719.4
m24 family metallopeptidasePhaeoP13_RS19715Not AvailableNegative44139 - 4543748686.7
sdr family nad(p)-dependent oxidoreductasePhaeoP13_RS19720Not AvailableNegative45503 - 4631228765.3
extracellular solute-binding proteinPhaeoP13_RS19725Not AvailableNegative46331 - 4808264405.0
sugar abc transporter substrate-binding proteinPhaeoP13_RS19730Not AvailablePositive48436 - 4934732482.0
sdr family oxidoreductasePhaeoP13_RS19735Not AvailablePositive49434 - 5022528210.7
abc transporter permeasePhaeoP13_RS19740Not AvailablePositive50301 - 5127533913.0
abc transporter permeasePhaeoP13_RS19745Not AvailablePositive51288 - 5228935623.4
sugar abc transporter atp-binding proteinPhaeoP13_RS19750Not AvailablePositive52286 - 5381555300.6

Displaying genes 281 – 290 of 368 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.