Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter piscinae |
| Strain | strain P13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | turbot rearing facility |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phaeobacter piscinae strain P13 plasmid pP13_f, complete sequence.
Gene Summary
Adenine Count
12618 bp
Thymine Count
12719 bp
Guanine Count
22451 bp
Cytosine Count
21417 bp
Genome Length
69205 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoacid dehydrogenase subunit beta | PhaeoP13_RS19705 | Not Available | Negative | 42064 - 43059 | 35770.3 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | PhaeoP13_RS19710 | Not Available | Negative | 43070 - 44065 | 36719.4 |
| m24 family metallopeptidase | PhaeoP13_RS19715 | Not Available | Negative | 44139 - 45437 | 48686.7 |
| sdr family nad(p)-dependent oxidoreductase | PhaeoP13_RS19720 | Not Available | Negative | 45503 - 46312 | 28765.3 |
| extracellular solute-binding protein | PhaeoP13_RS19725 | Not Available | Negative | 46331 - 48082 | 64405.0 |
| sugar abc transporter substrate-binding protein | PhaeoP13_RS19730 | Not Available | Positive | 48436 - 49347 | 32482.0 |
| sdr family oxidoreductase | PhaeoP13_RS19735 | Not Available | Positive | 49434 - 50225 | 28210.7 |
| abc transporter permease | PhaeoP13_RS19740 | Not Available | Positive | 50301 - 51275 | 33913.0 |
| abc transporter permease | PhaeoP13_RS19745 | Not Available | Positive | 51288 - 52289 | 35623.4 |
| sugar abc transporter atp-binding protein | PhaeoP13_RS19750 | Not Available | Positive | 52286 - 53815 | 55300.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
