Phaeobacter inhibens strain P88

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter inhibens strain P88 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for its presence in production sites, indicating its potential relevance in industrial or biotechnological applications. P. inhibens strain P88 possesses a total of seven replicons, which may contribute to its genetic diversity and adaptability in various environments. The strain is documented under multiple accessions, including NZ_CP010725.1, NZ_CP010726.1, NZ_CP010727.1, NZ_CP010728.1, NZ_CP010729.1, NZ_CP010732.1, and NZ_CP010733.1, reflecting its genetic characterization and the availability of genomic data. These accessions provide a resource for further research into its genetic makeup and functional capabilities. From a biological perspective, the presence of Phaeobacter inhibens strain P88 in production sites suggests its potential role in bioprocesses, possibly involving the production of bioactive compounds or bioremediation processes. The ecological insight gained from studying this strain could lead to a better understanding of its interactions within microbial communities and its contributions to the health of production environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter inhibens
Strainstrain P88

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatproduction sites
Biotic relationshipmutualistic symbioses
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitymarine algae

Genome Summary

Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.

Gene Summary

Adenine Count

46774 bp

Thymine Count

47427 bp

Guanine Count

67930 bp

Cytosine Count

64799 bp

Genome Length

226930 bp

Protein-coding Genes

204 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyl-diaminopimelate desuccinylasePhaeoP88_RS18425Not AvailablePositive3848865 - 385002241186.6
ribonuclease rPhaeoP88_RS18430Not AvailablePositive3850126 - 385239682964.4
duf1801 domain-containing proteinPhaeoP88_RS18435Not AvailableNegative3852417 - 385286316727.8
helix-turn-helix transcriptional regulatorPhaeoP88_RS18440Not AvailablePositive3852951 - 385368527108.6
lytic murein transglycosylasePhaeoP88_RS18445Not AvailablePositive3853795 - 385518950100.6
2-polyprenylphenol 6-hydroxylasePhaeoP88_RS18450Not AvailableNegative3855195 - 385673056641.3
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubiePhaeoP88_RS18455Not AvailableNegative3856734 - 385748628153.6
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyasePhaeoP88_RS18460Not AvailablePositive3857592 - 385844330838.2
enoyl-coa hydratasePhaeoP88_RS18465Not AvailablePositive3858508 - 385928428049.8
30s ribosomal protein s20PhaeoP88_RS18470Not AvailablePositive3859572 - 38598359676.76

Displaying genes 3941 – 3950 of 4476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.