Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | strain P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | PhaeoP88_RS18425 | Not Available | Positive | 3848865 - 3850022 | 41186.6 |
| ribonuclease r | PhaeoP88_RS18430 | Not Available | Positive | 3850126 - 3852396 | 82964.4 |
| duf1801 domain-containing protein | PhaeoP88_RS18435 | Not Available | Negative | 3852417 - 3852863 | 16727.8 |
| helix-turn-helix transcriptional regulator | PhaeoP88_RS18440 | Not Available | Positive | 3852951 - 3853685 | 27108.6 |
| lytic murein transglycosylase | PhaeoP88_RS18445 | Not Available | Positive | 3853795 - 3855189 | 50100.6 |
| 2-polyprenylphenol 6-hydroxylase | PhaeoP88_RS18450 | Not Available | Negative | 3855195 - 3856730 | 56641.3 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | PhaeoP88_RS18455 | Not Available | Negative | 3856734 - 3857486 | 28153.6 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | PhaeoP88_RS18460 | Not Available | Positive | 3857592 - 3858443 | 30838.2 |
| enoyl-coa hydratase | PhaeoP88_RS18465 | Not Available | Positive | 3858508 - 3859284 | 28049.8 |
| 30s ribosomal protein s20 | PhaeoP88_RS18470 | Not Available | Positive | 3859572 - 3859835 | 9676.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
