Phaeobacter inhibens strain P88

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter inhibens strain P88 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for its presence in production sites, indicating its potential relevance in industrial or biotechnological applications. P. inhibens strain P88 possesses a total of seven replicons, which may contribute to its genetic diversity and adaptability in various environments. The strain is documented under multiple accessions, including NZ_CP010725.1, NZ_CP010726.1, NZ_CP010727.1, NZ_CP010728.1, NZ_CP010729.1, NZ_CP010732.1, and NZ_CP010733.1, reflecting its genetic characterization and the availability of genomic data. These accessions provide a resource for further research into its genetic makeup and functional capabilities. From a biological perspective, the presence of Phaeobacter inhibens strain P88 in production sites suggests its potential role in bioprocesses, possibly involving the production of bioactive compounds or bioremediation processes. The ecological insight gained from studying this strain could lead to a better understanding of its interactions within microbial communities and its contributions to the health of production environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter inhibens
Strainstrain P88

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatproduction sites
Biotic relationshipmutualistic symbioses
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitymarine algae

Genome Summary

Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.

Gene Summary

Adenine Count

46774 bp

Thymine Count

47427 bp

Guanine Count

67930 bp

Cytosine Count

64799 bp

Genome Length

226930 bp

Protein-coding Genes

204 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmePhaeoP88_RS17780Not AvailableNegative3722259 - 372355145925.1
transcription termination factor rhoPhaeoP88_RS17785Not AvailableNegative3723584 - 372485547264.9
copd family proteinPhaeoP88_RS17790Not AvailableNegative3724985 - 372544017681.2
maf family proteinPhaeoP88_RS17795Not AvailablePositive3725846 - 372644522101.8
shikimate dehydrogenasePhaeoP88_RS17800Not AvailablePositive3726442 - 372727529800.8
dephospho-coa kinasePhaeoP88_RS17805Not AvailablePositive3727272 - 372786521569.8
dna polymerase iii subunit epsilonPhaeoP88_RS17810Not AvailablePositive3727858 - 372859526838.9
protein-export chaperone secbPhaeoP88_RS17815Not AvailableNegative3728675 - 372916918523.2
fxsa family proteinPhaeoP88_RS17820Not AvailableNegative3729248 - 372975418155.2
tim44/tima family putative adaptor proteinPhaeoP88_RS17825Not AvailablePositive3729870 - 373052623994.3

Displaying genes 3811 – 3820 of 4476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.