Phaeobacter inhibens strain P88

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter inhibens strain P88 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for its presence in production sites, indicating its potential relevance in industrial or biotechnological applications. P. inhibens strain P88 possesses a total of seven replicons, which may contribute to its genetic diversity and adaptability in various environments. The strain is documented under multiple accessions, including NZ_CP010725.1, NZ_CP010726.1, NZ_CP010727.1, NZ_CP010728.1, NZ_CP010729.1, NZ_CP010732.1, and NZ_CP010733.1, reflecting its genetic characterization and the availability of genomic data. These accessions provide a resource for further research into its genetic makeup and functional capabilities. From a biological perspective, the presence of Phaeobacter inhibens strain P88 in production sites suggests its potential role in bioprocesses, possibly involving the production of bioactive compounds or bioremediation processes. The ecological insight gained from studying this strain could lead to a better understanding of its interactions within microbial communities and its contributions to the health of production environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter inhibens
Strainstrain P88

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatproduction sites
Biotic relationshipmutualistic symbioses
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitymarine algae

Genome Summary

Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.

Gene Summary

Adenine Count

46774 bp

Thymine Count

47427 bp

Guanine Count

67930 bp

Cytosine Count

64799 bp

Genome Length

226930 bp

Protein-coding Genes

204 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal abc transporter solute-binding protein, zn/mn familyPhaeoP88_RS16570Not AvailableNegative3464112 - 346512235805.1
deoxyribose-phosphate aldolasePhaeoP88_RS16575Not AvailablePositive3465344 - 346633335672.1
aldehyde dehydrogenase family proteinPhaeoP88_RS16580Not AvailablePositive3466427 - 346876982846.8
m16 family metallopeptidasePhaeoP88_RS16585Not AvailableNegative3468867 - 347018647233.9
m16 family metallopeptidasePhaeoP88_RS16590Not AvailableNegative3470183 - 347160752497.8
duf3035 domain-containing proteinPhaeoP88_RS16600Not AvailableNegative3471903 - 347241818207.8
signal peptidase iiPhaeoP88_RS16605Not AvailableNegative3472472 - 347295417334.8
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolasePhaeoP88_RS16610Not AvailableNegative3473026 - 347461556287.9
heparinase ii/iii family proteinPhaeoP88_RS16615Not AvailableNegative3474639 - 347638163436.2
rsmb/nop family class i sam-dependent rna methyltransferasePhaeoP88_RS16620Not AvailableNegative3476515 - 347778045215.5

Displaying genes 3571 – 3580 of 4476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.