Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | strain P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigj | PhaeoP88_RS14415 | Not Available | Positive | 3055390 - 3056271 | 32231.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PhaeoP88_RS14420 | Not Available | Negative | 3056642 - 3057514 | 30485.6 |
| lytic transglycosylase domain-containing protein | PhaeoP88_RS14425 | Not Available | Positive | 3057656 - 3059614 | 71871.1 |
| dmt family transporter | PhaeoP88_RS14430 | Not Available | Negative | 3059588 - 3060505 | 33251.6 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | PhaeoP88_RS14435 | Not Available | Negative | 3060502 - 3061200 | 25194.4 |
| nad(p)/fad-dependent oxidoreductase | PhaeoP88_RS14440 | Not Available | Positive | 3061259 - 3062323 | 37266.2 |
| voc family protein | PhaeoP88_RS14445 | Not Available | Positive | 3062347 - 3062763 | 14381.7 |
| nadph-dependent fmn reductase | PhaeoP88_RS14450 | Not Available | Negative | 3062843 - 3063385 | 19098.7 |
| ompa family protein | PhaeoP88_RS14455 | Not Available | Negative | 3063595 - 3064254 | 22098.1 |
| helix-turn-helix transcriptional regulator | PhaeoP88_RS14460 | Not Available | Negative | 3064378 - 3065085 | 26090.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
