Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | strain P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | PhaeoP88_RS13375 | Not Available | Negative | 2826483 - 2827169 | 24970.9 |
| tryptophan--trna ligase | PhaeoP88_RS13380 | Not Available | Positive | 2827298 - 2828326 | 37838.5 |
| cold-shock protein | PhaeoP88_RS13385 | Not Available | Positive | 2828381 - 2828587 | 7319.51 |
| tetr/acrr family transcriptional regulator | PhaeoP88_RS13390 | Not Available | Negative | 2828760 - 2829356 | 21970.3 |
| phenylacetate--coa ligase paak | PhaeoP88_RS13395 | Not Available | Negative | 2829363 - 2830673 | 48642.4 |
| hydroxyphenylacetyl-coa thioesterase paai | PhaeoP88_RS13400 | Not Available | Negative | 2830689 - 2831114 | 15186.8 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paag | PhaeoP88_RS13405 | Not Available | Negative | 2831117 - 2831902 | 27795.2 |
| phenylacetic acid degradation bifunctional protein paaz | PhaeoP88_RS13410 | Not Available | Positive | 2832029 - 2834059 | 72514.6 |
| paax family transcriptional regulator c-terminal domain-containing protein | PhaeoP88_RS13415 | Not Available | Positive | 2834126 - 2834950 | 30501.5 |
| duf1636 family protein | PhaeoP88_RS13420 | Not Available | Positive | 2835343 - 2835768 | 14931.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
