Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | strain P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptf | PhaeoP88_RS09950 | Not Available | Positive | 2099851 - 2101002 | 42307.9 |
| lps export abc transporter permease lptg | PhaeoP88_RS09955 | Not Available | Positive | 2100999 - 2102102 | 39570.4 |
| lps-assembly protein lptd | PhaeoP88_RS09960 | Not Available | Positive | 2102104 - 2104293 | 81272.3 |
| peptidylprolyl isomerase | PhaeoP88_RS09965 | Not Available | Positive | 2104278 - 2105543 | 45118.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PhaeoP88_RS09970 | Not Available | Positive | 2105540 - 2106517 | 34366.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | PhaeoP88_RS09975 | Not Available | Positive | 2106641 - 2107486 | 30531.2 |
| duf4167 domain-containing protein | PhaeoP88_RS09980 | Not Available | Negative | 2107628 - 2108347 | 26423.9 |
| peptide chain release factor n(5)-glutamine methyltransferase | PhaeoP88_RS09985 | Not Available | Negative | 2108572 - 2109429 | 30217.0 |
| peptide chain release factor 1 | PhaeoP88_RS09990 | Not Available | Negative | 2109426 - 2110481 | 39083.3 |
| hypothetical protein | PhaeoP88_RS09995 | Not Available | Positive | 2110649 - 2110942 | 10417.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
