Phaeobacter inhibens strain P88

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter inhibens strain P88 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for its presence in production sites, indicating its potential relevance in industrial or biotechnological applications. P. inhibens strain P88 possesses a total of seven replicons, which may contribute to its genetic diversity and adaptability in various environments. The strain is documented under multiple accessions, including NZ_CP010725.1, NZ_CP010726.1, NZ_CP010727.1, NZ_CP010728.1, NZ_CP010729.1, NZ_CP010732.1, and NZ_CP010733.1, reflecting its genetic characterization and the availability of genomic data. These accessions provide a resource for further research into its genetic makeup and functional capabilities. From a biological perspective, the presence of Phaeobacter inhibens strain P88 in production sites suggests its potential role in bioprocesses, possibly involving the production of bioactive compounds or bioremediation processes. The ecological insight gained from studying this strain could lead to a better understanding of its interactions within microbial communities and its contributions to the health of production environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter inhibens
Strainstrain P88

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatproduction sites
Biotic relationshipmutualistic symbioses
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitymarine algae

Genome Summary

Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.

Gene Summary

Adenine Count

46774 bp

Thymine Count

47427 bp

Guanine Count

67930 bp

Cytosine Count

64799 bp

Genome Length

226930 bp

Protein-coding Genes

204 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal abc transporter atp-binding proteinPhaeoP88_RS19440Not AvailablePositive207687 - 20846327983.7
iron chelate uptake abc transporter family permease subunitPhaeoP88_RS19445Not AvailablePositive208463 - 20926027460.7
response regulatorPhaeoP88_RS19450Not AvailableNegative209398 - 21167783409.8
phnd/ssua/transferrin family substrate-binding proteinPhaeoP88_RS19455Not AvailableNegative211698 - 21252230063.4
pep/pyruvate-binding domain-containing proteinPhaeoP88_RS19460Not AvailablePositive212806 - 216831145391.0
murr/rpir family transcriptional regulatorPhaeoP88_RS19465Not AvailablePositive216946 - 21785432921.7
vi polysaccharide biosynthesis udp-n-acetylglucosamine c-6 dehydrogenase tvibPhaeoP88_RS19470Not AvailableNegative217880 - 21915146343.4
dimethylarginine dimethylaminohydrolase family proteinPhaeoP88_RS19475Not AvailableNegative219274 - 22005628154.6
5-guanidino-2-oxopentanoate decarboxylasePhaeoP88_RS19480Not AvailableNegative220060 - 22171557478.5
pyridoxal phosphate-dependent aminotransferasePhaeoP88_RS19485Not AvailableNegative221718 - 22290542272.5

Displaying genes 191 – 200 of 4476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.