Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | strain P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rata family toxin | PhaeoP88_RS07595 | Not Available | Positive | 1599614 - 1600060 | 17015.3 |
| ammonium transporter | PhaeoP88_RS07600 | Not Available | Negative | 1600142 - 1601323 | 40847.5 |
| cina family protein | PhaeoP88_RS07605 | Not Available | Negative | 1601529 - 1602011 | 16603.7 |
| phosphatidylglycerophosphatase a | PhaeoP88_RS07610 | Not Available | Negative | 1602014 - 1602520 | 17883.2 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PhaeoP88_RS07615 | Not Available | Negative | 1602517 - 1603737 | 42586.4 |
| trna dihydrouridine synthase dusb | PhaeoP88_RS07620 | Not Available | Positive | 1603929 - 1604942 | 35490.7 |
| two-component system sensor histidine kinase ntrb | PhaeoP88_RS07625 | Not Available | Positive | 1604939 - 1606081 | 40756.7 |
| response regulator | PhaeoP88_RS07630 | Not Available | Positive | 1606088 - 1607500 | 51055.6 |
| sensor histidine kinase ntry-like | PhaeoP88_RS07635 | Not Available | Positive | 1607600 - 1609879 | 84156.0 |
| sigma-54-dependent transcriptional regulator | PhaeoP88_RS07640 | Not Available | Positive | 1609876 - 1611291 | 52385.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
