Phaeobacter inhibens strain P88

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter inhibens strain P88 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for its presence in production sites, indicating its potential relevance in industrial or biotechnological applications. P. inhibens strain P88 possesses a total of seven replicons, which may contribute to its genetic diversity and adaptability in various environments. The strain is documented under multiple accessions, including NZ_CP010725.1, NZ_CP010726.1, NZ_CP010727.1, NZ_CP010728.1, NZ_CP010729.1, NZ_CP010732.1, and NZ_CP010733.1, reflecting its genetic characterization and the availability of genomic data. These accessions provide a resource for further research into its genetic makeup and functional capabilities. From a biological perspective, the presence of Phaeobacter inhibens strain P88 in production sites suggests its potential role in bioprocesses, possibly involving the production of bioactive compounds or bioremediation processes. The ecological insight gained from studying this strain could lead to a better understanding of its interactions within microbial communities and its contributions to the health of production environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter inhibens
Strainstrain P88

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatproduction sites
Biotic relationshipmutualistic symbioses
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitymarine algae

Genome Summary

Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.

Gene Summary

Adenine Count

46774 bp

Thymine Count

47427 bp

Guanine Count

67930 bp

Cytosine Count

64799 bp

Genome Length

226930 bp

Protein-coding Genes

204 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific tyrosine recombinase xerdPhaeoP88_RS07250Not AvailableNegative1525801 - 152681436651.8
hypothetical proteinPhaeoP88_RS07255Not AvailableNegative1526843 - 152856460771.8
hypothetical proteinPhaeoP88_RS23525Not AvailableNegative1528554 - 15287035417.73
shikimate kinasePhaeoP88_RS07260Not AvailablePositive1528785 - 152937521886.2
3-dehydroquinate synthasePhaeoP88_RS07265Not AvailablePositive1529404 - 153051639019.2
methyl-accepting chemotaxis proteinPhaeoP88_RS07270Not AvailableNegative1530668 - 153287580469.0
single-stranded dna-binding proteinPhaeoP88_RS07275Not AvailableNegative1533147 - 153368618508.2
lytic transglycosylase domain-containing proteinPhaeoP88_RS07280Not AvailablePositive1534032 - 153461621214.5
hypothetical proteinPhaeoP88_RS07285Not AvailablePositive1534912 - 153528613129.5
abc transporter atp-binding proteinPhaeoP88_RS07290Not AvailableNegative1535334 - 153742176357.5

Displaying genes 1741 – 1750 of 4476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.