Phaeobacter inhibens strain P88

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter inhibens strain P88 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for its presence in production sites, indicating its potential relevance in industrial or biotechnological applications. P. inhibens strain P88 possesses a total of seven replicons, which may contribute to its genetic diversity and adaptability in various environments. The strain is documented under multiple accessions, including NZ_CP010725.1, NZ_CP010726.1, NZ_CP010727.1, NZ_CP010728.1, NZ_CP010729.1, NZ_CP010732.1, and NZ_CP010733.1, reflecting its genetic characterization and the availability of genomic data. These accessions provide a resource for further research into its genetic makeup and functional capabilities. From a biological perspective, the presence of Phaeobacter inhibens strain P88 in production sites suggests its potential role in bioprocesses, possibly involving the production of bioactive compounds or bioremediation processes. The ecological insight gained from studying this strain could lead to a better understanding of its interactions within microbial communities and its contributions to the health of production environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter inhibens
Strainstrain P88

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatproduction sites
Biotic relationshipmutualistic symbioses
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitymarine algae

Genome Summary

Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.

Gene Summary

Adenine Count

46774 bp

Thymine Count

47427 bp

Guanine Count

67930 bp

Cytosine Count

64799 bp

Genome Length

226930 bp

Protein-coding Genes

204 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii plp-dependent enzymePhaeoP88_RS05995Not AvailablePositive1262817 - 126396840500.2
xanthine dehydrogenase family protein molybdopterin-binding subunitPhaeoP88_RS06000Not AvailablePositive1264090 - 126638782419.2
duf2235 domain-containing proteinPhaeoP88_RS06005Not AvailablePositive1266365 - 126755244091.6
acetyl-coa c-acyltransferasePhaeoP88_RS06010Not AvailableNegative1268111 - 126929541026.2
3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing proteinPhaeoP88_RS06015Not AvailableNegative1269292 - 127141276164.7
dimethylsulfonioproprionate lyase family proteinPhaeoP88_RS06020Not AvailableNegative1271424 - 127211025710.2
fatty acid--coa ligasePhaeoP88_RS06025Not AvailableNegative1272107 - 127373259056.5
lysr substrate-binding domain-containing proteinPhaeoP88_RS06030Not AvailablePositive1273948 - 127487135183.7
quaternary amine abc transporter atp-binding proteinPhaeoP88_RS06035Not AvailableNegative1274905 - 127596338683.9
abc transporter permeasePhaeoP88_RS06040Not AvailableNegative1275976 - 127700437176.5

Displaying genes 1491 – 1500 of 4476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.