Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | strain P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | PhaeoP88_RS04905 | Not Available | Positive | 1030525 - 1031532 | 36621.7 |
| cell division protein ftsl | PhaeoP88_RS04910 | Not Available | Positive | 1031529 - 1031903 | 14107.8 |
| peptidoglycan d,d-transpeptidase ftsi family protein | PhaeoP88_RS04915 | Not Available | Positive | 1031900 - 1033687 | 63867.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PhaeoP88_RS04920 | Not Available | Positive | 1033703 - 1035187 | 51721.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PhaeoP88_RS04925 | Not Available | Positive | 1035184 - 1036596 | 48720.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | PhaeoP88_RS04930 | Not Available | Positive | 1036624 - 1037706 | 38587.1 |
| glutaminase | PhaeoP88_RS04935 | Not Available | Negative | 1038038 - 1038952 | 32835.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | PhaeoP88_RS04940 | Not Available | Positive | 1039077 - 1040474 | 49250.4 |
| marr family winged helix-turn-helix transcriptional regulator | PhaeoP88_RS04945 | Not Available | Negative | 1040478 - 1040921 | 16715.3 |
| putative quinol monooxygenase | PhaeoP88_RS04950 | Not Available | Negative | 1040926 - 1041219 | 11066.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
