Rugosibacter aromaticivorans strain Ca6

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Sterolibacteriaceae

Genus

Rugosibacter

Description

Rugosibacter aromaticivorans strain Ca6 is a Gram-negative, non-motile bacterium characterized as a heterotroph, which means it derives its energy from organic compounds. This strain exhibits a rod-shaped morphology and is classified as aerobic, indicating that it requires oxygen for its metabolism and growth. The optimal growth temperature for Rugosibacter aromaticivorans strain Ca6 is 32°C, placing it within the mesophilic range, which generally encompasses organisms that thrive at moderate temperatures. The strain is noted to have a single replicon, a feature that may influence its genetic stability and replication processes. The strain has been cataloged under the accession number NZ_CP010554.1, which provides a reference for its genetic and genomic information in biological databases. This accession allows for further research and study into its metabolic pathways and potential applications. From an ecological perspective, the heterotrophic and aerobic nature of Rugosibacter aromaticivorans strain Ca6 suggests its role in organic matter decomposition and nutrient cycling in its environment. By utilizing organic compounds, it could contribute to the breakdown of complex molecules, thereby facilitating the availability of nutrients for other organisms in its ecosystem. This trait underscores the importance of such bacteria in maintaining ecological balance and health in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilySterolibacteriaceae
GenusRugosibacter
SpeciesRugosibacter aromaticivorans
Strainstrain Ca6

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Rugosibacter aromaticivorans strain Ca6 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isocitrate lyasePG1C_RS03985Not AvailableNegative763273 - 76457147380.9
atp-dependent clp protease atp-binding subunit clpaPG1C_RS03990Not AvailableNegative764914 - 76719083370.5
atp-dependent clp protease adapter clpsPG1C_RS03995Not AvailableNegative767190 - 76751011825.5
cold-shock proteinPG1C_RS04000Not AvailablePositive767906 - 7681097212.46
nadp-dependent isocitrate dehydrogenasePG1C_RS04005Not AvailableNegative768264 - 76949344826.2
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabPG1C_RS04010Not AvailableNegative769709 - 77103448925.9
7-cyano-7-deazaguanine synthase quecPG1C_RS04015Not AvailablePositive771110 - 77179323915.0
50s ribosomal protein l13PG1C_RS04020Not AvailablePositive771991 - 77241916077.6
30s ribosomal protein s9PG1C_RS04025Not AvailablePositive772444 - 77283614474.5
n-acetyl-gamma-glutamyl-phosphate reductasePG1C_RS04030Not AvailablePositive772937 - 77396536766.3

Displaying genes 801 – 810 of 2921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.