Rugosibacter aromaticivorans strain Ca6

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Sterolibacteriaceae

Genus

Rugosibacter

Description

Rugosibacter aromaticivorans strain Ca6 is a Gram-negative, non-motile bacterium characterized as a heterotroph, which means it derives its energy from organic compounds. This strain exhibits a rod-shaped morphology and is classified as aerobic, indicating that it requires oxygen for its metabolism and growth. The optimal growth temperature for Rugosibacter aromaticivorans strain Ca6 is 32°C, placing it within the mesophilic range, which generally encompasses organisms that thrive at moderate temperatures. The strain is noted to have a single replicon, a feature that may influence its genetic stability and replication processes. The strain has been cataloged under the accession number NZ_CP010554.1, which provides a reference for its genetic and genomic information in biological databases. This accession allows for further research and study into its metabolic pathways and potential applications. From an ecological perspective, the heterotrophic and aerobic nature of Rugosibacter aromaticivorans strain Ca6 suggests its role in organic matter decomposition and nutrient cycling in its environment. By utilizing organic compounds, it could contribute to the breakdown of complex molecules, thereby facilitating the availability of nutrients for other organisms in its ecosystem. This trait underscores the importance of such bacteria in maintaining ecological balance and health in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilySterolibacteriaceae
GenusRugosibacter
SpeciesRugosibacter aromaticivorans
Strainstrain Ca6

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Rugosibacter aromaticivorans strain Ca6 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductasePG1C_RS14310Not AvailableNegative2893260 - 289405427971.7
2-oxopent-4-enoate hydratasePG1C_RS14315Not AvailableNegative2894066 - 289484827748.0
aldehyde dehydrogenase family proteinPG1C_RS14875Not AvailableNegative2894857 - 28950998952.75
2-hydroxymuconic semialdehyde dehydrogenasePG1C_RS14320Not AvailableNegative2895018 - 289631346178.8
duf924 family proteinPG1C_RS14325Not AvailableNegative2896553 - 289717322897.9
dna topoisomerase iiiPG1C_RS14330Not AvailableNegative2897173 - 289979497925.5
duf494 family proteinPG1C_RS14335Not AvailableNegative2899862 - 290034717870.3
dna-processing protein dpraPG1C_RS14340Not AvailableNegative2900352 - 290155741987.8
lysm peptidoglycan-binding domain-containing proteinPG1C_RS14345Not AvailableNegative2901511 - 290255437834.6
peptide deformylasePG1C_RS14350Not AvailablePositive2902667 - 290317018386.4

Displaying genes 2881 – 2890 of 2921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.